JS-050 MED: bin/delete.js — staged removal + branch tombstone

be delete as JS: stage a file's removal (dirty-gate → unlink → delete row), bare-sweep vanished tracked files, dir recursive-unlink, and the ?br branch tombstone. Reuses JS-049's stage.js. ← JS-047+JS-048+JS-049. Part of JS-046. Method: Issues.

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